#nexus begin data; dimensions ntax=5 nchar=402; format datatype=DNA gap=- missing=?; matrix [----+----|----+----|----+----|----+----|----+----|----+----|----+----|----+----|----+----|----+-100|----+----|----+----|----+----|----+----|----+----|----+----|----+----|----+----|----+----|----+-200|----+----|----+----|----+----|----+----|----+----|----+----|----+----|----+----|----+----|----+-300|----+----|----+----|----+----|----+----|----+----|----+----|----+----|----+----|----+----|----+-400|--] [<-- geneA geneA --><-- geneB geneB -->] A GCGGGC---AGTTTCAAATCCATGAACTTCGTACAGAGCATCTCGGAGGAAGATGAGCAATGTTCACGGAAAAAGAAGAGAGATTTTGTCCATGTCTTACTGATCAAAAAAAAGAAGACCTTTGTGACCGTGACAGATGCTAGGGGGAATAAGAAGACTGGGGCCTCCGCAGGTTGTTTGGAGGAAAGAAAAGGGCGGTCTCGTCTTTCTCGGTATGCTGCTGAAGCAACTGCGGAACATGTCGGGCGATCCGCCAGAAAGATGGGTTTGAAGTCAGTTGTAATGAAAGTGAAAGGATATACTTTTTTCAGGAAAAAGAAAAAAGTGATCTTGAGCTGGAGAGAAGGTTTT------------------CTAGGTGAAGGAGTAGGAGATCAATCTCCAATT B GCAGGC---AGTTTCAAATTCAAGAACTTCGTACAGAGCATCTCGGAGGAATATAAACAATGTGAACGGAAAAAGAAGAGAGATTTTATCCATGTCTTACTGATGAAAAATAAG---ACCTTTGTGACCGTGACAGATGCTAGGGGGAATAAAAAGACTGGGGCCTCCGCAGGTTGTTTGGGGTAAATAAAAGGGCGGTCTCGTCTTTCTCGATATGCTGCTGAAGCAACTGCGGAACATGTCGGGCGATCCGCCAGAAAGATGGGTTTAAAGTCAGTTGTCATGAAAGTGAAAGGATCTACTTATTTCCAGAAAAAGAAGAAAGTGATCTTGAGCTGGGGAGAAGGTTTT------------------CGGGGTGAAAGAGTAAGAGATCAATCTCCTATT C GCGGGCAGGAGTTTCAAATCCATGAACTTCGTACAGAGCATTTCGGAGGAAGATGAGCAATTGGAGCGGAAA---AACAAAGATTTTGTCCATTTACCACCGATCCACAATAAT---ACCTTTGTTACCGTGACGGATGCTAGGGGGAATAAAAAAACTGGGGCCTCCGCAGGTTGTTTGGAGGAAAGAAAAGGGCGGTCTCGTCTTTCTCGGTATGCTGCTGAAGCTACTGCGGAACATGTCGGGCGATCCGCCAGAAAGATGGGTTTGAAGTCAGTTGTAATGAAAGTGAAAGGATCTAGTTATTTCAGGAAAAAGAAAAAAGTGATCTTGAGCTGGAGAGAAGGTTTT------------------CGAGGTGAAGGAGTAGGAGATCAATCTCCAATT D TCGGGCAGGAGTTTCAAATCCATGAACTTCGTACAGAGCATTTCGGAGGAAGATGAGCAATTGGAGCGGAAA---AACAAAGATTTTGTCCATTTACTACCGATCCACAATAAT---ACCTTTGTTACCGTGACGGATGCTAGGGGGAATAAAAAAACTGGGGCCTCCGCAGGTTGTTTGGAGGAAATAAAAGGGGGGTCTCGTCTTTCTCGGTATGCTGCTGAAGCAACTGCAGAACATGTCGGGCGATCCGCCAGAAATCTGGGGATGAAGTCGGTTGTAATGAAAGTGAAAGGATCTACTTATTTCAGGAAAAAGAAAGCAGTGATCTTGAGCTGGAGAGAAGGTTATACCTTTGCTGAGTGTAAGCGAAGTGAAGGAGTAGGAGATCAATCTAAAATT E GCGGGCAGGAGTTTCAAATCCATGAACTTCGTACAGAGCATTTCGGAGGAAGATGAGCAATTGGAGCGGAAA---AACAAAGATTTTGTCCATTTACCACCGATCCACAATAAT---ACCTTTGTTACCGTGACGGATGCTAGGGGGAACAAAAAAACTGGGGCCTCCGCAGGTTGTTTGGAGGAAATCAAAGGGGGGTCTCGTCTTTCTCGGTATGCTGCTGAAGCAACTGCAGAACATGTCGGGCGATCCGCCAGAAATCTGGGGATGAAGTCGGTTGTAATGAAAGTGAAAGGATCTACTTATTTCAGGAAAAAGAAAGCAGTGATCTTGAGCTGGAGAGAAGGTTATACCTTTGCTGAGTGTAAGCGAAGTGAAGGAGTAGGAGATCAATCTCAAATT ; end; begin sets; charset geneA = 1-180; [180 sites] charset geneB = 181-402; [222 sites] end;